Nature Methods

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Open Source Web App Helps Researchers Explore Cancer Genetics

Press Release | Brown University | July 23, 2015

Brown University computer scientists have developed a new interactive tool to help researchers and clinicians explore the genetic underpinnings of cancer. The tool — dubbed MAGI, for Mutation Annotation and Genome Interpretation — is an open-source web application that enables users to search, visualize, and annotate large public cancer genetics datasets, including data from The Cancer Genome Atlas (TCGA) project. “The main motivation for MAGI has been to reduce the computational burden required for researchers or doctors to explore and annotate cancer genomics data,” said Max Leiserson, a Ph.D. student at Brown who led the development of the tool.

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Researchers develop new method for analysing cell function

Press Release | Academy of Finland | June 26, 2012

Researchers in Finland and Germany have developed an open-source software that will make it significantly easier to process bioimaging data. The software, named BioImageXD, will help in analysing cell and tissue functions.

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