COVID-19

See the following -

Immunization and COVID-19: Open Source Solutions

The United States is starting to emerge from a nation-wide shut down imposed to slow down the spread of COVID-19. Most states are starting to reopen, and while higher education will likely stay largely remote this fall, primary and secondary schools are expected to reopen as the economy tries to get back on its feet. As both children and adults begin to spend more time together again, it is important to understand the impact that COVID-19 is having on current immunization practices and services, and how open source software is being leveraged to keep the population safe.

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Coronavirus Adds New Stress To Antiquated Health Record-Keeping

Darius Tahir | Politico | March 11, 2020

The U.S. health care system is on the leading edge of many technologies - except when it comes to passing information between doctors, laboratories, and public health officials. And that could add another snarl to the already troubled effort to test for coronavirus. Overreliance on faxing, phones and paper records is problem enough in ordinary times. Adding thousands of coronavirus tests a day will test the ability of providers, labs, and public health officials to keep track of all the results. Because not all results are automatically downloaded into physicians' records, the doctors may need to log into laboratory web portals or, if all else fails, turn to faxes and phones to learn test results.

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Coronavirus and the Recurring Mistake of Fighting the Wrong Wars

What do the coronavirus and Navy ships have in common? For that matter, what do our military spending and our healthcare spending have in common? More than you might think, and it boils down to this: we spend too much for too little, in large part because we tend to always be fighting the wrong wars.I started thinking about this a couple weeks ago due to a WSJ article about the U.S. Navy's "aging and fragmented technology." An internal Navy strategy memo warned that the Navy is "under cyber siege" by foreign adversaries, leaking information "like a sieve." It grimly pointed out...

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Coronavirus Lessons From the Asteroid That Didn't Hit Earth

Benny Peiser and Andrew Monfort | Wall Street Journal | April 2, 2020

London: The coronavirus pandemic has dramatically demonstrated the limits of scientific modeling to predict the future. The most consequential coronavirus model, produced by a team at Imperial College London, tipped the British government, which had until then pursued a cautious strategy, into precipitate action, culminating in the lockdown under which we are all currently laboring. With the Imperial team talking in terms of 250,000 to 510,000 deaths in the U.K. and social media aflame with demands for something to be done, Prime Minister Boris Johnson had no other option. But last week, a team from Oxford University put forward an alternative model of how the pandemic might play out, suggesting a much less frightening future and a speedy end to the current nightmare.

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Corporate Resilience During A Pandemic

As humanity grapples with the spread of COVID-19 globally, the emotional response is to do something, anything, everything. But how do we take that energy and successfully adapt? Most prudent organizations have had on their radar more visible threats like hurricanes, earthquakes, power outages, terrorism, and war. The quiet pervasiveness of a pandemic seems to have caught us by surprise. But is adapting to a pandemic really that different? The good news is that proven principles still apply. Read More »

COVID-19 Will Be The Ultimate Stress Test For Electronic Health Record Systems

Eric D. Perakslis and Erich Huang | STAT | March 12, 2020

As the novel coronavirus that causes Covid-19 continues its march around the world and through the United States, it is spawning another kind of infection: Covid-19 cyber threats aimed at individuals and health systems. We aren't crying wolf here. Disaster planning experts know all too well that preexisting weaknesses become worse during crises. The WannaCry cyber attack that devastated the United Kingdom's National Health Service is a good example. Outdated infrastructure containing components with long-understood vulnerabilities are a hacker's paradise...The undeniable fact that electronic health record systems are designed to track and bill procedures rather than provide optimal patient care is likely to be on full display as the health system becomes increasingly saturated with Covid-19 patients.

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Hiding Our Heads in the Sand - Why the US is Unprepared for Pandemics and Disasters

A new report from the Trust for America's Health minces no words. President and CEO John Auerbach charges: COVID-19 has shined a harsh spotlight on the country's lack of preparedness for dealing with threats to Americans' well-being. Years of cutting funding for public health and emergency preparedness programs has left the nation with a smaller-than-necessary public health workforce, limited testing capacity, an insufficient national stockpile, and archaic disease tracking systems - in summary, twentieth-century tools for dealing with twenty-first-century challenges.

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How Laboratories and their Systems can Weather Natural Disasters and Pandemics

We are currently experiencing a global pandemic - which, while perhaps included in disaster preparedness Standard Operating Procedures (SOPs) by many labs as a possible disaster, still has caught most the infrastructure and health systems of most nations largely unprepared, and is causing major disruption because it was arguably not seen as one of the most likely events. Disaster preparedness has typically tended to focus on IT and data management risks and/or natural disasters. SOPs center around standard, daily lab safety. The truth is that whatever the odds of a particular disaster, they become 100% once they happen. It's important to have sufficient risk-reduction SOPs in play, and a good Continuity Of Operations Plan (COOP) for each potential scenario to ensure the best chance of coping during the event and recovering afterwards.

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How open source software is fighting COVID-19

Since the end of January, the [open source] community has contributed to thousands of open source repositories that mention coronavirus or COVID-19. These repositories consist of datasets, models, visualizations, web and mobile applications, and more, and the majority are written in JavaScript and Python. Previously, we shared information about several open hardware makers helping to stop the spread and suffering caused by the coronavirus. Here, we're sharing four (of many) examples of how the open source software community is responding to coronavirus and COVID-19, with the goal of celebrating the creators and the overall impact the open source community is making on the world right now.

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How to Contribute to Open Source Healthcare Projects for COVID-19

Many of those that are familiar with the maker movement, including me, believe there is a significant opportunity to apply open source design principles and mass-scale collaborative distributed manufacturing technologies (like open source 3D printing) to at least partially overcome medical supply shortages during the COVID-19 pandemic...Many people agree there is enormous potential with the approach despite the challenges and have started to self-organize to develop open source hardware to fight COVID-19. The largest group is Project Open Air. They are a group of "Helpful Engineers" who have congregated to aid in the COVID-19 pandemic response by developing both open source hardware and open source software. The Helpful Engineers are working on medical devices such as open source ventilators, to create a solution that can be quickly reproduced and assembled locally worldwide. Read More »

LabLynx

LabLynx, Inc. was the first Laboratory Informatics provider to deliver a true browser-based Laboratory Information Management Solution (LIMS) in 1997. The core LabLynx team has combined software development and laboratory management experience of over 575 human years invested in the LabLynx LIMS product lines. Additionally, LabLynx has been the leader in establishing the paradigm of the LIMS as a platform-based, total laboratory solution, rather than just a means to track samples.

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LabLynx Joins the COVID-19 Fight by Introducing Laboratory System Dedicated to Infectious Disease Diagnostic Testing

Press Release | LabLynx | April 9, 2020

LabLynx, Inc., long-time leader in enterprise-level cloud-hosted LIMS/LIS, today announced it has developed the world's first LIMS (Laboratory Information Management System) dedicated specifically to COVID-19 diagnostic testing. Called "CovidLiMS," its main features include, crucially, swift setup-to-live time: 2-5 days, including training, according to LabLynx President John H. Jones.

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Michigan Tech Engineering Team Joins Open Source Ventilator Movement

Press Release | Michigan Technological University | March 20, 2020

As COVID-19 continues to spread, the research community is looking for solutions. In addition to work on vaccines and medicine, medical technology is needed. In severe cases of COVID-19, the disease attacks the respiratory system, and one of the major bottlenecks in treatment is having enough ventilators. The open-source hardware community wants to change that. Joshua Pearce...an open-source hardware expert and co-editor-in-chief of HardwareX [explained] that 3D-printed lab hardware and other open-source tech can be cost-effective and encourages design improvement. "Even complex medical devices are not outside the realm of possibility anymore."

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Pandemics Are the Mother of Invention

Many believe that the Allies won WWII in large part because of how industry in the U.S. geared up to produce fantastic amounts of weapons and other war materials. It took some time for businesses to retool and get production lines flowing, during which the Axis powers made frightening advances, but once they did it was only a matter of time until the Allies would prevail. Similarly, COVID-19 is making scary inroads around the world, while businesses are still gearing up to produce the number of ventilators, personal protective equipment (PPE), tests, and other badly needed supplies. COVID-19 is currently outnumbering these efforts, but eventually we'll get the necessary equipment in the needed amounts. Eventually. What intrigues me, though, is how people are innovating, inventing new solutions to the shortages we face. I want to highlight a few of these:

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The Need for Speed - It's Time to Act!

As a society we also need to get moving on the population level as well - and the sooner the better! In his fascinating genomic epidemiology detective work Trevor Bedford conducted based on the COVID-19 research he and his team had done in the Bedford lab in Seattle WA, he concluded that the narrow testing that was done in the Seattle area in the early days of the Coronavirus spread allowed the virus to spread faster. In contrast, the Coronavirus testing-blitz in South Korea appears to keep the death rate lower than it could be. It's time to test! The FDA gave high-tech labs the green light to operate tests before receiving any agency review or authorization and both Quest Diagnostics and LabCorp already announced that they have test in the market. But according to CDC, as of March 8 there were only 1,707 tests performed in the US vs. 189,236 in South Korea.

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